2012 review: The year in health science









































Read more: "2013 Smart Guide: 10 ideas that will shape the year"











The first half of 2012 will be remembered for the saga over whether or not to publish controversial research involving versions of the H5N1 bird flu virus engineered to spread more easily in mammals. In the end openness won out, and both contentious studies did finally see the light of day.












This was also the year that saw the battle to eradicate polio reach its crucial endgame – just as another problem, in the form of totally drug resistant tuberculosis, reared its head.












Away from infectious disease, 2012 brought us a theory on the link between Tutankhamun, epilepsy and the first monotheistic religion, and an insight into the perils of premature ageing in Italy's ominously named Triangle of Death. Here are 10 more of the year's memorable stories.












Babies are born dirty, with a gutful of bacteria
Far from being sterile, babies come complete with an army of bacteria. The finding could have implications for gut disorders and our health in general












Forensic failure: 'Miscarriages of justice will occur'
Our survey of UK forensic scientists reveals that many are concerned that closure of the Forensic Science Service will lead to miscarriages of justice












Scandal of an underfunded and undertreated cancer
Lung cancer in those who have never smoked is on the rise – but they face the same stigma as their smoking counterparts












Ovarian stem cells discovered in humans
Stem cells capable of forming new eggs could promise limitless eggs for IVF treatments, and the rejuvenation of older eggs












Paralysis breakthrough: spinal cord damage repaired
An implant helping paralysed people stand unaided suggests the spinal cord is able to recover function years after severe damage












A real fMRI high: My ecstasy brain scan
Graham Lawton reports the highs, lows and psychedelic purple doors involved in taking MDMA while having his brain scanned












You may carry cells from siblings, aunts and uncles
Male cells found in the umbilical cord blood of baby girls with older brothers suggests fetal cells cross between mother and baby more than once thought












Can we deter athletes who self-harm to win?
The Paralympics may encourage a debate on a dangerous practice – and potential ways to prevent it












First non-hormonal male 'pill' prevents pregnancy
A non-hormonal drug that temporarily reverses male fertility appears to have few side effects in mice












Mining MRSA genetic code halts superbug outbreak
Whole genome sequencing of an MRSA outbreak has identified the person who unwittingly spread the bacteria around a hospital, stopping further infection

















































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Clinton has blood clot close to her brain, say doctors






NEW YORK: Top US diplomat Hillary Clinton is suffering from a blood clot in a vein in her head but should make a full recovery, doctors said on Monday as she spent New Year's Eve in hospital.

A routine scan on Sunday had revealed "that a right transverse sinus venous thrombosis had formed," doctors Lisa Bardack, of Mount Kisco Medical Group, and Gigi El-Bayoumi, of George Washington University, said in a statement.

They described it as "a clot in the vein that is situated in the space between the brain and the skull behind the right ear. It did not result in a stroke, or neurological damage."

Clinton was admitted to the New York Presbyterian Hospital on Sunday following the discovery and is being treated with blood thinners to dissolve the clot. She will be released "once the medication dose has been established."

"In all other aspects of her recovery, the secretary is making excellent progress and we are confident she will make a full recovery. She is in good spirits, engaging with her doctors, her family, and her staff," they added.

Her top aide, Philippe Reines, said on Sunday the popular US secretary of state would stay in the hospital for some 48 hours after being admitted so she could be monitored while on the anti-coagulant drugs.

The globe-trotting diplomat has not been seen in public after succumbing to a stomach virus on returning from a trip to Europe on December 7.

It's a rare absence for the most popular member of President Barack Obama's cabinet, who has been a highly-visible and loyal supporter of his foreign policy agenda, travelling almost a million miles during four years in office.

But Clinton, 65, has made it clear she intends to step down in the coming weeks, once Senator John Kerry, tapped by President Barack Obama to replace her, is confirmed by the Senate.

Clinton fell ill with the bad stomach bug virus on her return from her trip to Prague, Brussels, Dublin and Belfast, which caused her to become dehydrated. She fainted and suffered a concussion.

According to one media report on the website Buzzfeed, she was being treated amid tight security on the hospital's 9th floor, known as the VIP wing, where her husband, former president Bill Clinton, had bypass surgery in 2004.

The couple's daughter, Chelsea, was seen leaving the hospital visibly upset on Monday, The New York Daily News said.

It is not the first health scare for Clinton. In 1998, the then first lady had a blood clot in her leg which she told the New York Daily News was "scary because you have to treat it immediately - you don't want to take the risk that it will break loose and travel to your brain, or your heart or your lungs."

Though once seen as a deeply divisive figure, she now has approval ratings above 60 percent. And many believe she will run again for the White House in 2016, despite being narrowly defeated by Obama for the Democratic nomination in 2008.

A Gallup poll released Monday showed Clinton again topping an annual list of the woman most admired by Americans, winning support from 21 percent of those surveyed. It is the 17th time she has topped the list, a landmark for Gallup.

Clinton's lengthy absence from public life had sparked claims from some of her fiercest critics that she was faking illness to avoid testifying before lawmakers investigating a deadly attack on a US mission in Libya.

The September 11 assault on the US mission in eastern Benghazi, in which the US ambassador and three other American officials were killed, sparked a political firestorm in the United States. A subsequent State Department inquiry found that security at the mission was "grossly inadequate."

- AFP/de



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Amazon apologizes for Netflix's Christmas Eve streaming outage




Amazon has posted an apology for a disruption in its cloud services that hobbled Netflix's streaming services on Christmas Eve and said it is taking steps to prevent future disruptions.


Although Amazon's explanation of the outage didn't identify Netflix by name, the streaming service blamed Amazon Web Services last week for an outage that affected "many but not all devices" across the Americas.


"We want to apologize," Seattle-based Amazon said in its statement. "We know how critical our services are to our customers' businesses, and we know this disruption came at an inopportune time for some of our customers."


Amazon Web Services runs more than 835,000 requests per second for hundreds of thousands of customers in 190 countries, including 300 government agencies and 1,500 educational institutions. Amazon says it is "committed" to a 99.95 percent uptime, but frequent disruptions in service could undermine customer confidence in the platform, which offers remote Web-based computing services.


The disruption began shortly after noon Pacific time on December 24 when data was accidentally deleted by a developer during maintenance on the East Coast Elastic Load Balancing system, which is designed to distribute traffic volume among servers. The normal service was restored by 10:30 a.m. PT on December 25, but at the height of the disruption, 6.8 percent of ELBs were impacted, the company said.




As a result of the disruption, Amazon said it has adopted procedures that requires developers to obtain specific Change Management approval from Amazon Web Services for each time they access the Elastic Load Balancing system.


"We will do everything we can to learn from this event and use it to drive further improvements in the ELB service," the company said.


Netflix responded to Amazon's apology by saying it was proud of its streaming service's record of staying up even when other AWS-hosted services were down but added that it's working to improve its own line of defense.


"Netflix is designed to handle failure of all or part of a single availability zone in a region as we run across three zones and operate with no loss of functionality on two," the company said in a blog post this afternoon. "We are working on ways of extending our resiliency to handle partial or complete regional outages."


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Space Pictures This Week: Ice “Broccoli,” Solar Storm









































































































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Hillary Clinton's Blood Clot Located in Her Head


gty hillary clinton jef 121231 wblog Clintons Blood Clot in Her Head Near Right Ear

Michal Sula/MAFRA/isifa/Getty Images


The blood clot that put Secretary of  State Hillary Clinton in the hospital was found in her head between her brain and skull behind the right ear, her doctors said today.


“It did not result in a stroke, or neurological damage,” her doctors,  Drs. Lisa Bardack and Gigi El-Bayoumi, said in a joint statement. “To help dissolve this clot, her medical team began treating the secretary with blood thinners.”


The doctors  said Clinton will be released “once the medication dose has been established.”


Clinton, 65, was admitted to New York Presbyterian hospital on Sunday for treatment of a blood clot stemming  from a concussion she sustained a few weeks ago, a Clinton aide said.


“In the course of a routine follow-up MRI on Sunday, the scan revealed that a right transverse sinus venous thrombosis had formed. This is a clot in the vein that is situated in the space between the brain and the skull behind the right ear,” the doctors said.


“In all other aspects of her recovery, the secretary is making excellent progress and we are confident she will make a full recovery. She is in good spirits, engaging with her doctors, her family, and her staff,” the statement said.


Clinton was supposed to be back at work at the State Department this week, but now the date of her return in unknown.


Details of Clinton’s blood clot had not been immediately released after her hospitalization.


Members of Congress wished Clinton a speedy recovery today, while pressing their call for her to testify before Congress about the U.S. consulate attack in Benghazi.


“We just want to say how much Secretary Clinton is in our prayers this morning and hope she recovers rapidly from this health problem,” Sen. Joe Lieberman, I-Conn.,   said at a press conference today. Lieberman is chairman of the Senate Homeland Security Committee.


“Secretary Clinton has made clear that she will testify. And I think that’s a good idea,” said Lieberman.


House Foreign Affairs Chairman Rep. Illeana Ros-Lehtinen, R.-Fla., tweeted get well wishes to Clinton Sunday night,  but also mentioned Benghazi. “Wishing Secretary Clinton a full + speedy recovery!,” Ros-Lehtinen wrote. “She’s looking forward 2 testify on #Benghazi and is bummed she can’t travel now like b4.”


The committee released a new report last week which concludes that the security system was “flashing red” in Benghazi shortly before Ambassador Christopher Stevens and three other Americans were killed in an attack by terrorists on Sept. 11. The report cited a “rising crescendo of evidence” from the U.S. intelligence community that Benghazi had become “dangerous and unstable, and that a significant attack against American personnel there was becoming more and more likely.”


Lieberman called the administration’s reaction to the flashing red indicators as “woefully inadequate.”


Sen.  Susan Collins, R-Maine, said she thinks other must be held accountable at the State Department, in addition to those who have already resigned following the release of the State Department’s internal investigation. The Accountability Review Board issues a scathing report which faulted some senior management at the State Department for the breakdown of security and resulted in the four officials stepping down.


“My hope is, and my expectation is, that once Secretary Clinton is well enough, that she will carefully review our report and see if there are other officials that need to be held accountable,” Collins said. “It is difficult for us to make that judgment, but I believe that it is likely that there are others that do need to be held accountable.”


The congressional report found that the environment in Benghazi was dangerous and that local security was inadequate for protection. The report also found that the departments of Defense and State had not jointly assessed the availability and the accessibility of U.S. assets to support the mission facility in Benghazi in the event of an attack, such as the one that occurred.


“We should have closed this facility in Benghazi until we were prepared to provide the security necessary to give minimal protection, adequate protection to American personnel,” Lieberman said.


The report concludes that it is clear that terrorists were responsible for the attack on the consulate and that the administration response bouncing between the State Department, the Pentagon and the intelligence community added to some “confusion” over the attack.


Many conservatives have been skeptical of  Clinton’s illness, with former U.N. ambassador John Bolton telling Fox News  Clinton had come down with a “diplomatic illness” to avoid testifying on Dec. 2o, a charge the State Department vigorously denied.


“These people do not know what they are talking about,” spokesperson Victoria Nuland responded.


Dr. Howard Markel, a practicing doctor and medical historian at the University of Michigan, tells ABC News that history shows the best response to rumors is transparency.  The State Department did not disclose that Clinton had a concussion until several days after it occurred and currently waited a day to disclose what part of her body her blood clot is in, leaving the media and others to make assumptions about the seriousness of her condition.


“In the absence of information, this kind of speculation often takes up the vacuum,” says Markel, who points out that Clinton is receiving excellent medical care and that her condition sounds treatable.


State Department officials say they have been transparent about the secretary’s health, keeping the press and the public aware of all major developments within a reasonable amount of time, but they also maintain that Clinton is entitled to some degree of medical privacy, a claim Markel says held up historically but does not today.


“If you’re a private person, you are entitled to your privacy as a patient. When you’re a public figure and you’re working on behalf of the American people, you give up many aspects of your privacy,” he said.


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E. Timor bids farewell to peacekeepers after 13 years






DILI: The UN ends its peacekeeping mission in East Timor Monday after 13 years of boots on the ground in Asia's youngest nation following a bloody transition to independence.

The mission, which saw the presence of some 1,500 UN troops and police, will take down its flag and send home the last of its peacekeepers, including five Portuguese officers, while a "liquidation team" of 79 will remain to tie up loose ends.

The mission began withdrawing troops in earnest in October when national police resumed responsibility for security, following the peaceful election of a new president and parliament.

"The Timorese people and its leaders have shown courage and unswerving resolve to overcome great challenges," United Nations Integrated Mission in Timor-Leste (UNMIT) chief Finn Reske-Nielsen said in a statement.

"Although there remains much work ahead, this is an historic moment in recognising the progress already made."

Reske-Nielsen said the withdrawal did not mark an end to the partnership between the UN and the country, officially called Timor-Leste, as "challenges still remain".

"As peacekeepers depart, we look forward to a new phase in this relationship focusing on social and economic development."

Observers say there is little indication that there will be renewed violence in the short term, but public institutions, including the police force and judiciary, remain weak.

There are also concerns that rampant poverty, high unemployment rates among the youth and a fast-growing population could lead to future unrest.

Government critics have highlighted the economy's heavy reliance on significant but depleting offshore oil and gas reserves that they say benefit urban Timorese more than the regional poor.

The UN played a key role in the birth of East Timor, organising the 1999 vote that ended Indonesia's 24-year occupation, in which around 183,000 people -- then a quarter of the population -- died from fighting, starvation or disease.

It oversaw East Timor until 2002, when an independent government took over.

UN peacekeepers streamed in again in 2006, when a mass desertion among the armed forces prompted fighting between military factions and police, and street violence left at least 37 people dead and tens of thousands displaced.

The only major violence since was a failed assassination attempt on then-President Jose Ramos-Horta in 2008.

- AFP/jc



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TwitPic snared by Google's malware detector



Google tags TwitPic as malware host.



(Credit:
Screenshot by Steven Musil/CNET)



Google's Web site malware checker identified TwitPic as a security threat today, a classification that has the popular photo site baffled.


Instead of the usual archiving and sharing tools they are used to, users attempting to visit TwitPic today are being greeted by a message informing them that the site has been blocked because "visiting it now is very likely to infect your computer with malware."


TwitPic denied on Twitter that it was a malware threat and said it was trying to contact Google to resolve the issue:



The Web giant's Safe Browsing API is designed to protect its users from malware and other attacks. Google said in June that it finds about 9,500 new malicious Web sites each day, either innocent ones that have been compromised by hackers or sites built specifically to distribute malware or for phishing. It also said it sends several million warnings every day to users of Chrome,
Firefox, and
Safari about malware and phishing on sites the users are about to visit.

CNET has contacted Google for comment on the action and will update this report when we learn more.

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How to Banish That New Year's Eve Hangover


For those of us who enjoy the occasional cocktail, the holiday season would be incomplete without certain treats of the liquid variety. Some look forward to the creamy charms of rum-laced eggnog; others anticipate cupfuls of high-octane punch or mugs of warm, spiced wine.

No matter what's in your glass, raising one as the year winds down is tradition. What could be more festive? The problem is, one drink leads to two, then the party gets going and a third is generously poured. Soon, the music fades and the morning arrives—and with it, the dreaded hangover. (Explore a human-body interactive.)

Whether it's a pounding headache, a queasy stomach, sweating, or just general misery, the damage has been done. So now it's time to remedy the situation. What's the quickest way to banish the pain? It depends who you ask.

Doctors typically recommend water for hydration and ibuprofen to reduce inflammation. Taking B vitamins is also good, according to anesthesiologist Jason Burke, because they help the body metabolize alcohol and produce energy.

Burke should know a thing or two about veisalgia, the medical term for hangover. At his Las Vegas clinic Hangover Heaven, Burke treats thousands of people suffering from the effects of drinking to excess with hydrating fluids and medications approved by the U.S. Food and Drug Administration.

"No two hangovers are the same," he said, adding that the unfavorable condition costs society billions of dollars-mostly from lost productivity and people taking sick days from work.

Hot Peppers for Hangovers?

So what's the advice from the nonmedical community? Suggestions range from greasy breakfasts to vanilla milkshakes to spending time in a steamy sauna. A friend insists hot peppers are the only way to combat a hangover's wrath. Another swears by the palliative effects of a bloody mary. In fact, many people just have another drink, following the old "hair of the dog that bit you" strategy.

Whether such "cures" actually get rid of a hangover is debatable, but one thing's for sure: the sorry state is universal. The only people immune to hangovers are the ones who avoid alcohol altogether.

So for those who do indulge, even if it's just once in awhile, see our interactive featuring cures from around the world (also above). As New Year's Eve looms with its attendant excuse to imbibe, perhaps it would be wise to stock your refrigerator with one of these antidotes. Pickled herring, anyone?


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Cliffhanger: 'Major Setback' For Budget Talks













With less than two days remaining for Congress to reach a budget agreement that would avoid the so-called "fiscal cliff," a senior White House official tells ABC News that President Obama is still "modestly optimistic" that a deal can be struck to prevent middle class taxes from increasing on New Year's Day.


Vice President Biden has now re-emerged as a key player, back in Washington and playing "a direct role" in trying to make a deal with Senate Republicans. Biden has been tapped because of his long-standing relationship with Senate Republican Leader Mitch McConnell.


A Democratic source says that McConnell seems to be genuinely interested in getting an agreement. The news dovetails with reports that the GOP has backed off a key Social Security measure that had stalled negotiations.


According to sources, the row was sparked when the GOP offered a proposal that included a new method of calculating entitlement benefits with inflation. Called the "chained consumer price index," or Chained CPI, the strategy has been criticized by some Democrats because it would lower cost of living increases for Social Security recipients.


"We thought it was mutually understood that it was off the table for a scaled-back deal," a Democratic aide said. "It's basically a poison pill."


President Obama has floated chained CPI in the past as part of a grand bargain, despite opposition from the AARP and within his own party.


Also in the Republican plan brought today: An extension of the current estate tax and no increase in the debt ceiling. Higher income earners would see their taxes increase, but at levels "well above $250,000," the sources said.






J. Scott Applewhite/AP Photo











Sens. Charles Schumer and Jon Kyl on 'This Week' Watch Video











Fiscal Cliff Negotiations: Could Economy Slip Back into Recession? Watch Video





That "major setback" in the talks was evident on the floor of the Senate this afternoon.


"I'm concerned about the lack of urgency here, I think we all know we are running out of time," Senate Minority Leader Mitch McConnell, R-Ky., said, "I want everyone to know I am willing to get this done, but I need a dance partner."


McConnell said he submitted the Republican's latest offer to Majority Leader Harry Reid, D-Nev., at 7:10 pm last night and was willing to work through the night. Reid promised to get back to him at 10 this morning, but has yet to do so.


Why have the Democrats not come up with a counteroffer? Reid admitted it himself moments later.


"At this stage we're not able to make a counteroffer," Reid said noting that he's had numerous conversations with Obama, but the two parties are still far apart on some big issues, "I don't have a counteroffer to make. Perhaps as the day wears on I will be able to."


McConnell said he believes there is no major issue that is the sticking point but rather, "the sticking point appears to be a willingness, an interest, or frankly the courage to close the deal."


Reid said the fiscal cliff negotiations are getting "real close" to falling apart completely.


"At some point in the negotiating process, it appears that there are things that stop us from moving forward," he said. "I hope we're not there but we're getting real close and that's why I still hold out hope that we can get something done. But I'm not overly optimistic but I am cautiously optimistic that we can get something done."


Reid said there are serious difference between the two sides, starting with Social Security. He said Democrats are not willing to cut Social Security benefits as part of a smaller, short-term agreement, as was proposed in the latest Republican proposal.


"We're not going to have any Social Security cuts. At this stage it just doesn't seem appropriate," he said. "We're open to discussion about entitlement reforms, but we're going to have to take a different direction. The present status will not work."


Reid said that even 36 hours before the country could go over the cliff, he remains "hopeful" but "realistic," about the prospects of reaching an agreement.


"The other side is intentionally demanding concessions they know we are not willing to make," he said.






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Today on New Scientist: 28 December 2012







Best videos of 2012: Rare view of Challenger tragedy

Watch a rare amateur video of the Challenger explosion, our most-viewed video of the year



Strong jet stream super-charged US Christmas storms

Record snowfall and dozens of tornadoes snarled holiday travel as a powerful winter storm plowed across much of the US, while rainstorms battered the UK



2012 review: The year in life science

The year's biggest stories in life science, including James Cameron's descent into the Mariana trench and efforts to break into Antarctica's buried lakes



Superstorm lessons for adapting to climate change

As the post-Sandy rebuild gets under way, coastal cities around the world will be watching



Best videos of 2012: First MRI movie of childbirth

Watch a unique view of a baby's birth, at number 2 in our countdown of the year's top science videos



Fleadom or death: Reviving the glorious flea circus

The parasite-based sideshows were almost done for by the domestic vacuum cleaner - but they are bouncing back, finds Graham Lawton



Approval for gene-modified salmon spawns controversy

Apparently months late, US regulators have declared genetically engineered fish safe to farm and eat, but final approval could be some way off



Best videos of 2012: New aircraft flies inside out

Watch a novel flying machine use a unique mechanism to propel itself, at number 3 in our countdown of the top videos of the year



2012 review: The year in technology

The year's biggest stories in technology, including Kinect devices that may spot signs of autism and controlling a robot by the power of thought



Superdoodles: The science of scribbling

Far from being a distraction, doodling has an important purpose - and you can harness it



2013 Smart Guide: Wave goodbye to the mouse

The Leap, a 3D motion control device set to launch next year, will let you control your computer with touch-free hand and finger movements





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